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EchinoBase
An Echinoderm genomic database

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  • About
    • About Us
    • Participants
    • References
  • Species
    • Strongylocentrotus purpuratus
      • About S.purpuratus
      • Gene Search
      • Transcriptome Tools
      • JBrowse
      • ATAC-seq Browser
      • Blast
      • Static Links
        • Baylor Sea Urchin Genome Project
        • Sea Urchin Genome at NCBI
        • Sea Urchin Gene Catalog at MPIMG
        • S. purpuratus Gene Expression - NIDCR
        • Endomesoderm Gene Regulatory Network
        • Virtual Urchin
      • Resources
        • Filters
        • QPCR primers
        • Nanostring Codeset
        • Sea Urchin codon usage
      • Literature Search
      • Downloads
    • Patiria miniata
      • About P.miniata
      • Gene Search
      • Transcriptome Search
      • JBrowse
      • Blast
      • Literature Search
      • Downloads
    • Lytechinus variegatus
      • About L.variegatus
      • Gene Search
      • Transcriptome Search
      • JBrowse
      • Blast
      • Literature Search
      • Atlas of L. variegatus Development
      • Downloads
    • Parastichopus parvimensis
      • About P.parvimensis
      • Gene Search
      • Transcriptome Search
      • JBrowse
      • Blast
      • Downloads
    • Ophiothrix spiculata
      • About O.spiculata
      • Blast
      • Downloads
    • Eucidaris tribuloides
      • About E. tribuloides
      • Transcriptome Search
      • Blast
      • Downloads
    • Other Species
      • Ovary Transcriptomes
        • About Ovary Transcriptomes
        • Transcriptome Search
        • Blast
        • Downloads
      • Lytechinus pictus
      • Strongylocentrotus franciscanus
        • About S.franciscanus
        • Downloads
      • Allocentrotus fragilis
        • About A.fragilis
        • Downloads
      • Echinoderm Expression Data @GEO
      • Echinoderm RNAseq Data @SRA
      • Amphiura filiformis
  • Tools
    • Gene Search
    • Transcriptome Search
    • JBrowse
    • Blasts
    • BAC Resources
    • Image and Video Gallery
    • Literature Search
    • Downloads
  • How To
    • Strongylocentrotus purpuratus
      • Genome Assemblies
      • SPU genes
      • SPU proteins
      • Resources
      • Other data
      • Laboratory Methods and Materials
      • Sp Other Assemblies
    • Patiria miniata
      • Genome Assemblies
      • PMI genes
    • Lytechinus variegatus
      • Genome Assemblies
      • LVA genes
      • Lv Other Assemblies
    • Parastichopus parvamensis
      • Genome Assembly
      • PPA Genes
    • Ophiothrix spiculata
      • Genome Assemblies
    • Eucidaris tribuloides
      • Genome Assembly
    • Tools
      • EchinoBase navigation guide
      • Gene Search
      • Genome Browser (JBrowse)
      • Genome Blast
      • GBrowse
      • Downloading data
    • Transcriptomes
    • Other genomes
    • Literature
    • Bioinformatics Resources
  • Contact
  • Site map
  • S.purpuratus Quick Search
Home »How To »Tools

Tools

  • EchinoBase navigation guide
  • JBrowse:Genome Browser
  • Gene Search
  • Genome BLAST
  • Downloading Data
  • GBrowse 0.5 and 3.1