PPA Genes

MAKER2 predicted genes


We have used MAKER2 pipeline to predict genes. There are 17,379 predicted genes for V1.0 assembly. Briefly gene models were generated by masking all repeats, training set was generated using EST(isotigs) and protein evidence alignments to the genome(Scaffold) and finally genes were predicted using ab initio predictors(SNAP, GeneMark and AUGUSTUS).

PPA genes can be searched using our PPA Gene Search